No. words: 625; after pruning: 599


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:266)  255  0.00 0.37 0.00  MoSU032F_F04_BE442982Td06P015C03P024G081F1_022.ab1        1   267 (33)  C MoSU032R_F04_BE442982Td06P015C03P024G081R1_022.ab1   (57)   268     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C MoSU032R_F04_BE442982Td06P015C03P024G081R1_022.ab1   325 
   90    MoSU032F_F04_BE442982Td06P015C03P024G081F1_022.ab1    32 
   94  C MoSU032R_F04_BE442982Td06P015C03P024G081R1_022.ab1   232 
   98    MoSU032F_F04_BE442982Td06P015C03P024G081F1_022.ab1    40 
Contig length: old 358, new 358

Contig length: old 358, new 358
New start: 0