No. words: 1384; after pruning: 1358


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:862)  515  0.19 0.00 0.00  MoSU003F_C07_BE443312As01P005H03H091F1_050.ab1       86   606 (0)  C MoSU003R_C07_BE443312As01P005H03H091R1_050.ab1   (0)   778   258 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1    MoSU003F_C07_BE443312As01P005H03H091F1_050.ab1     1 
  377  C MoSU003R_C07_BE443312As01P005H03H091R1_050.ab1   487 
  381    MoSU003F_C07_BE443312As01P005H03H091F1_050.ab1   381 
  385  C MoSU003R_C07_BE443312As01P005H03H091R1_050.ab1   479 
  393    MoSU003F_C07_BE443312As01P005H03H091F1_050.ab1   393 
  397  C MoSU003R_C07_BE443312As01P005H03H091R1_050.ab1   467 
  401    MoSU003F_C07_BE443312As01P005H03H091F1_050.ab1   401 
  405  C MoSU003R_C07_BE443312As01P005H03H091R1_050.ab1   459 
  437    MoSU003F_C07_BE443312As01P005H03H091F1_050.ab1   437 
  445  C MoSU003R_C07_BE443312As01P005H03H091R1_050.ab1   419 
Contig length: old 863, new 863

Contig length: old 863, new 863
New start: 0