No. words: 1470; after pruning: 1444


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:844)  620  0.00 0.00 0.00  MoSU003F_D07_BE443312As02P005H03H091F1_058.ab1       97   721 (0)  C MoSU003R_D07_BE443312As02P005H03H091R1_058.ab1   (0)   749   125 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1    MoSU003F_D07_BE443312As02P005H03H091F1_058.ab1     1 
  388  C MoSU003R_D07_BE443312As02P005H03H091R1_058.ab1   458 
  404    MoSU003F_D07_BE443312As02P005H03H091F1_058.ab1   404 
  412  C MoSU003R_D07_BE443312As02P005H03H091R1_058.ab1   434 
  420    MoSU003F_D07_BE443312As02P005H03H091F1_058.ab1   420 
  456  C MoSU003R_D07_BE443312As02P005H03H091R1_058.ab1   390 
  460    MoSU003F_D07_BE443312As02P005H03H091F1_058.ab1   460 
  464  C MoSU003R_D07_BE443312As02P005H03H091R1_058.ab1   382 
  472    MoSU003F_D07_BE443312As02P005H03H091F1_058.ab1   472 
  484  C MoSU003R_D07_BE443312As02P005H03H091R1_058.ab1   362 
  488    MoSU003F_D07_BE443312As02P005H03H091F1_058.ab1   488 
  500  C MoSU003R_D07_BE443312As02P005H03H091R1_058.ab1   346 
Contig length: old 845, new 845

Contig length: old 845, new 845
New start: 0