No. words: 1469; after pruning: 1443


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:830)  633  0.00 0.00 0.00  MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1       54   691 (0)  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   (0)   778   141 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1     1 
  393  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   439 
  397    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   397 
  409  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   423 
  413    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   413 
  449  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   383 
  453    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   453 
  461  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   371 
  465    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   465 
  473  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   359 
  485    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   485 
  489  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   343 
  513    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   513 
  517  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   315 
  525    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   525 
  529  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   303 
  565    MoSU003F_E07_BE443312At01P005H03H091F1_051.ab1   565 
  573  C MoSU003R_E07_BE443312At01P005H03H091R1_051.ab1   259 
Contig length: old 831, new 831

Contig length: old 831, new 831
New start: 0