No. words: 1476; after pruning: 1450


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:834)  629  0.00 0.16 0.00  MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1       78   717 (0)  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   (0)   759   119 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1     1 
  394  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   442 
  398    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   398 
  450  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   386 
  454    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   454 
  458  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   378 
  462    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   462 
  474  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   362 
  478    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   478 
  494  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   342 
  498    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   498 
  502  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   334 
  514    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   514 
  534  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   302 
  538    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   538 
  546  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   290 
  562    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   562 
  574  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   262 
  594    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   594 
  598  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   238 
  602    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   602 
  606  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   230 
  618    MoSU003F_F07_BE443312At02P005H03H091F1_059.ab1   618 
  622  C MoSU003R_F07_BE443312At02P005H03H091R1_059.ab1   214 
Contig length: old 835, new 835

Contig length: old 835, new 835
New start: 0