No. words: 1392; after pruning: 1366


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 11.1 (1,1:548)  542  0.00 0.00 0.00  MoSU007F_F11_BE443312Ld02P015H05H111F1_085.ab1        6   549 (161)  C MoSU007R_F11_BE443312Ld02P015H05H111R1_085.ab1   (138)   544     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C MoSU007R_F11_BE443312Ld02P015H05H111R1_085.ab1   682 
  198    MoSU007F_F11_BE443312Ld02P015H05H111F1_085.ab1    65 
  206  C MoSU007R_F11_BE443312Ld02P015H05H111R1_085.ab1   477 
  242    MoSU007F_F11_BE443312Ld02P015H05H111F1_085.ab1   109 
Contig length: old 843, new 843

Contig length: old 843, new 843
New start: 0