No. words: 1546; after pruning: 1520


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:864)  676  0.00 0.00 0.00  MoSU003F_B08_BE443312Ld04P005H03H091F1_061.ab1       50   730 (0)  C MoSU003R_B08_BE443312Ld04P005H03H091R1_061.ab1   (0)   816   136 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1    MoSU003F_B08_BE443312Ld04P005H03H091F1_061.ab1     1 
  261  C MoSU003R_B08_BE443312Ld04P005H03H091R1_061.ab1   605 
  265    MoSU003F_B08_BE443312Ld04P005H03H091F1_061.ab1   265 
  401  C MoSU003R_B08_BE443312Ld04P005H03H091R1_061.ab1   465 
  433    MoSU003F_B08_BE443312Ld04P005H03H091F1_061.ab1   433 
  449  C MoSU003R_B08_BE443312Ld04P005H03H091R1_061.ab1   417 
  453    MoSU003F_B08_BE443312Ld04P005H03H091F1_061.ab1   453 
  473  C MoSU003R_B08_BE443312Ld04P005H03H091R1_061.ab1   393 
  505    MoSU003F_B08_BE443312Ld04P005H03H091F1_061.ab1   505 
  509  C MoSU003R_B08_BE443312Ld04P005H03H091R1_061.ab1   357 
  517    MoSU003F_B08_BE443312Ld04P005H03H091F1_061.ab1   517 
  521  C MoSU003R_B08_BE443312Ld04P005H03H091R1_061.ab1   345 
Contig length: old 865, new 865

Contig length: old 865, new 865
New start: 0