No. words: 1468; after pruning: 1442


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:864)  594  0.17 0.00 0.00  MoSU003F_C08_BE443312Ld05P005H03H091F1_054.ab1      114   716 (0)  C MoSU003R_C08_BE443312Ld05P005H03H091R1_054.ab1   (0)   752   150 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1    MoSU003F_C08_BE443312Ld05P005H03H091F1_054.ab1     1 
  407  C MoSU003R_C08_BE443312Ld05P005H03H091R1_054.ab1   459 
  411    MoSU003F_C08_BE443312Ld05P005H03H091F1_054.ab1   411 
  455  C MoSU003R_C08_BE443312Ld05P005H03H091R1_054.ab1   411 
  459    MoSU003F_C08_BE443312Ld05P005H03H091F1_054.ab1   459 
  467  C MoSU003R_C08_BE443312Ld05P005H03H091R1_054.ab1   399 
  487    MoSU003F_C08_BE443312Ld05P005H03H091F1_054.ab1   487 
  511  C MoSU003R_C08_BE443312Ld05P005H03H091R1_054.ab1   355 
Contig length: old 865, new 865

Contig length: old 865, new 865
New start: 0