No. words: 1531; after pruning: 1505


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 13.9 (1,1:886)  633  0.16 0.00 0.00  MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1       98   740 (1)  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   (0)   790   148 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1    MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1     1 
  380  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   508 
  384    MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1   384 
  416  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   472 
  420    MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1   420 
  428  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   460 
  432    MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1   432 
  464  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   424 
  468    MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1   468 
  480  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   408 
  504    MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1   504 
  508  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   380 
  512    MoSU003F_F08_BE443312Ld08P005H03H091F1_063.ab1   512 
  516  C MoSU003R_F08_BE443312Ld08P005H03H091R1_063.ab1   372 
Contig length: old 887, new 887

Contig length: old 887, new 887
New start: 0