No. words: 1542; after pruning: 1516


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:877)  652  0.30 0.00 0.00  MoSU003F_G08_BE443312Ld09P005H03H091F1_056.ab1       75   738 (0)  C MoSU003R_G08_BE443312Ld09P005H03H091R1_056.ab1   (0)   804   141 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1    MoSU003F_G08_BE443312Ld09P005H03H091F1_056.ab1     1 
  382  C MoSU003R_G08_BE443312Ld09P005H03H091R1_056.ab1   497 
  394    MoSU003F_G08_BE443312Ld09P005H03H091F1_056.ab1   394 
  398  C MoSU003R_G08_BE443312Ld09P005H03H091R1_056.ab1   481 
  406    MoSU003F_G08_BE443312Ld09P005H03H091F1_056.ab1   406 
  410  C MoSU003R_G08_BE443312Ld09P005H03H091R1_056.ab1   469 
  438    MoSU003F_G08_BE443312Ld09P005H03H091F1_056.ab1   438 
  442  C MoSU003R_G08_BE443312Ld09P005H03H091R1_056.ab1   437 
  446    MoSU003F_G08_BE443312Ld09P005H03H091F1_056.ab1   446 
  458  C MoSU003R_G08_BE443312Ld09P005H03H091R1_056.ab1   421 
  474    MoSU003F_G08_BE443312Ld09P005H03H091F1_056.ab1   474 
  478  C MoSU003R_G08_BE443312Ld09P005H03H091R1_056.ab1   401 
Contig length: old 878, new 878

Contig length: old 878, new 878
New start: 0