No. words: 1544; after pruning: 1518


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:888)  631  0.00 0.31 0.31  MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1       71   725 (0)  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   (0)   819   165 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1    MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1     1 
  379  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   511 
  383    MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1   383 
  415  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   475 
  435    MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1   435 
  439  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   451 
  443    MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1   443 
  451  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   439 
  455    MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1   455 
  463  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   427 
  503    MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1   503 
  507  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   383 
  511    MoSU003F_H08_BE443312Ld10P005H03H091F1_064.ab1   511 
  519  C MoSU003R_H08_BE443312Ld10P005H03H091R1_064.ab1   371 
Contig length: old 889, new 889

Contig length: old 889, new 889
New start: 0