No. words: 1124; after pruning: 1098


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:637)  472  0.42 0.00 0.00  MoSU018F_G08_BE443312Sn25P005H03P023D091F1_052.ab1      158   638 (5)  C MoSU018R_G08_BE443312Sn25P005H03P023D091R1_052.ab1   (0)   481     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1    MoSU018F_G08_BE443312Sn25P005H03P023D091F1_052.ab1     1 
  418  C MoSU018R_G08_BE443312Sn25P005H03P023D091R1_052.ab1   221 
  422    MoSU018F_G08_BE443312Sn25P005H03P023D091F1_052.ab1   422 
  510  C MoSU018R_G08_BE443312Sn25P005H03P023D091R1_052.ab1   129 
  514    MoSU018F_G08_BE443312Sn25P005H03P023D091F1_052.ab1   514 
  526  C MoSU018R_G08_BE443312Sn25P005H03P023D091R1_052.ab1   113 
  538    MoSU018F_G08_BE443312Sn25P005H03P023D091F1_052.ab1   538 
  542  C MoSU018R_G08_BE443312Sn25P005H03P023D091R1_052.ab1    97 
  610    MoSU018F_G08_BE443312Sn25P005H03P023D091F1_052.ab1   610 
  623  C MoSU018R_G08_BE443312Sn25P005H03P023D091R1_052.ab1    16 
Contig length: old 643, new 638

Contig length: old 638, new 638
New start: 0