No. words: 1338; after pruning: 1312


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:586)  568  0.85 0.00 0.00  MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1        1   587 (70)  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   (94)   587     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   681 
  106    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1    12 
  118  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   564 
  136    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1    42 
  400  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   282 
  404    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   310 
  416  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   266 
  436    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   342 
  464  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   218 
  476    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   382 
  480  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   202 
  528    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   434 
  556  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   126 
  564    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   470 
  572  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1   110 
  592    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   498 
  596  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1    86 
  616    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   522 
  624  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1    58 
  636    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   542 
  648  C MoSU018R_H08_BE443312Sn26P005H03P023D091R1_050.ab1    34 
  652    MoSU018F_H08_BE443312Sn26P005H03P023D091F1_050.ab1   558 
Contig length: old 751, new 751

Contig length: old 751, new 751
New start: 0