No. words: 1336; after pruning: 1310


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.8 (1,1:656)  593  1.28 0.00 0.16  MoSU018F_A09_BE443312Sn27P005H03P023D091F1_079.ab1       32   658 (50)  C MoSU018R_A09_BE443312Sn27P005H03P023D091R1_079.ab1   (2)   626     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1    MoSU018F_A09_BE443312Sn27P005H03P023D091F1_079.ab1     1 
  456  C MoSU018R_A09_BE443312Sn27P005H03P023D091R1_079.ab1   202 
  460    MoSU018F_A09_BE443312Sn27P005H03P023D091F1_079.ab1   460 
  480  C MoSU018R_A09_BE443312Sn27P005H03P023D091R1_079.ab1   178 
  484    MoSU018F_A09_BE443312Sn27P005H03P023D091F1_079.ab1   484 
  524  C MoSU018R_A09_BE443312Sn27P005H03P023D091R1_079.ab1   134 
  560    MoSU018F_A09_BE443312Sn27P005H03P023D091F1_079.ab1   560 
  584  C MoSU018R_A09_BE443312Sn27P005H03P023D091R1_079.ab1    74 
  600    MoSU018F_A09_BE443312Sn27P005H03P023D091F1_079.ab1   600 
  604  C MoSU018R_A09_BE443312Sn27P005H03P023D091R1_079.ab1    54 
  608    MoSU018F_A09_BE443312Sn27P005H03P023D091F1_079.ab1   608 
Contig length: old 708, new 708

Contig length: old 708, new 708
New start: 0