No. words: 1407; after pruning: 1381


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:644)  631  0.00 0.00 0.31  MoSU018F_E09_BE443312Sn31P005H03P023D091F1_071.ab1        1   646 (50)  C MoSU018R_E09_BE443312Sn31P005H03P023D091R1_071.ab1   (67)   644     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C MoSU018R_E09_BE443312Sn31P005H03P023D091R1_071.ab1   711 
   71    MoSU018F_E09_BE443312Sn31P005H03P023D091F1_071.ab1     4 
   87  C MoSU018R_E09_BE443312Sn31P005H03P023D091R1_071.ab1   625 
   91    MoSU018F_E09_BE443312Sn31P005H03P023D091F1_071.ab1    24 
  107  C MoSU018R_E09_BE443312Sn31P005H03P023D091R1_071.ab1   605 
  111    MoSU018F_E09_BE443312Sn31P005H03P023D091F1_071.ab1    44 
  667  C MoSU018R_E09_BE443312Sn31P005H03P023D091R1_071.ab1    45 
  683    MoSU018F_E09_BE443312Sn31P005H03P023D091F1_071.ab1   616 
Contig length: old 762, new 763

Contig length: old 763, new 763
New start: 0