No. words: 1392; after pruning: 1366


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:658)  645  0.00 0.00 0.30  MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1        1   660 (23)  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   (51)   658     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   709 
   59    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1     8 
   91  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   619 
   99    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1    48 
  107  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   603 
  111    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1    60 
  135  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   575 
  139    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1    88 
  215  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   495 
  219    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1   168 
  255  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   455 
  275    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1   224 
  287  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   423 
  331    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1   280 
  335  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   375 
  571    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1   520 
  575  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1   135 
  651    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1   600 
  655  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1    55 
  671    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1   620 
  675  C MoSU018R_A07_BE443312Ta11P005H03P023D091R1_063.ab1    35 
  687    MoSU018F_A07_BE443312Ta11P005H03P023D091F1_063.ab1   636 
Contig length: old 733, new 734

Contig length: old 734, new 734
New start: 0