No. words: 1483; after pruning: 1457


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:698)  680  0.14 0.14 0.14  MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1        1   699 (38)  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   (47)   699     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   746 
   61    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1    13 
   65  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   682 
   69    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1    21 
   73  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   674 
   93    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1    45 
  141  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   606 
  145    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1    97 
  153  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   594 
  165    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   117 
  177  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   570 
  185    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   137 
  525  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   222 
  529    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   481 
  561  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   186 
  569    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   521 
  637  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1   110 
  649    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   601 
  657  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1    90 
  661    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   613 
  669  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1    78 
  681    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   633 
  685  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1    62 
  720    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   672 
  724  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1    23 
  728    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   680 
  737  C MoSU018R_C02_BE443312Ta11P023A08P005H091R1_012.ab1    11 
  741    MoSU018F_C02_BE443312Ta11P023A08P005H091F1_012.ab1   693 
Contig length: old 784, new 785

Contig length: old 785, new 785
New start: 0