No. words: 1395; after pruning: 1369


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:660)  647  0.00 0.15 0.15  MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1        1   661 (23)  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   (50)   661     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   711 
   54    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1     4 
   98  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   613 
  102    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1    52 
  206  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   505 
  210    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   160 
  218  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   493 
  246    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   196 
  270  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   441 
  274    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   224 
  402  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   309 
  446    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   396 
  474  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   237 
  502    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   452 
  538  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   173 
  554    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   504 
  562  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   149 
  570    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   520 
  574  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1   137 
  606    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   556 
  614  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1    97 
  622    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   572 
  626  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1    85 
  634    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   584 
  638  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1    73 
  678    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   628 
  682  C MoSU018R_C07_BE443312Ta13P005H03P023D091R1_059.ab1    29 
  686    MoSU018F_C07_BE443312Ta13P005H03P023D091F1_059.ab1   636 
Contig length: old 734, new 734

Contig length: old 734, new 734
New start: 0