No. words: 1488; after pruning: 1462


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 14.9 (1,1:703)  686  0.00 0.00 0.14  MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1        7   704 (41)  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   (46)   697     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   743 
   66    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1    26 
   74  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   670 
   94    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1    54 
  110  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   634 
  114    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1    74 
  154  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   590 
  162    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   122 
  198  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   546 
  202    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   162 
  526  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   218 
  530    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   490 
  558  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   186 
  570    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   530 
  638  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1   106 
  646    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   606 
  666  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1    78 
  690    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   650 
  694  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1    50 
  706    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   666 
  714  C MoSU018R_E02_BE443312Ta13P023A08P005H091R1_008.ab1    30 
  718    MoSU018F_E02_BE443312Ta13P023A08P005H091F1_008.ab1   678 
Contig length: old 784, new 785

Contig length: old 785, new 785
New start: 0