No. words: 1377; after pruning: 1351


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:643)  636  0.16 0.00 0.00  MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1        1   644 (39)  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   (50)   644     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   694 
   62    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1    12 
  106  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   589 
  114    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1    64 
  126  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   569 
  138    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1    88 
  146  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   549 
  150    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   100 
  266  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   429 
  310    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   260 
  402  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   293 
  414    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   364 
  422  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   273 
  450    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   400 
  474  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   221 
  558    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   508 
  562  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   133 
  570    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   520 
  574  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1   121 
  606    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   556 
  610  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1    85 
  622    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   572 
  626  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1    69 
  630    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   580 
  634  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1    61 
  650    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   600 
  662  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1    33 
  666    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   616 
  682  C MoSU018R_D07_BE443312Ta14P005H03P023D091R1_057.ab1    13 
  686    MoSU018F_D07_BE443312Ta14P005H03P023D091F1_057.ab1   636 
Contig length: old 733, new 733

Contig length: old 733, new 733
New start: 0