No. words: 1399; after pruning: 1373


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 11.2 (1,1:712)  625  0.47 0.00 0.00  MoSU018F_F02_BE443312Ta14P023A08P005H091F1_006.ab1        6   647 (0)  C MoSU018R_F02_BE443312Ta14P023A08P005H091R1_006.ab1   (44)   708    67 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU018R_F02_BE443312Ta14P023A08P005H091R1_006.ab1   752 
   48    MoSU018F_F02_BE443312Ta14P023A08P005H091F1_006.ab1     9 
   64  C MoSU018R_F02_BE443312Ta14P023A08P005H091R1_006.ab1   689 
   68    MoSU018F_F02_BE443312Ta14P023A08P005H091F1_006.ab1    29 
   84  C MoSU018R_F02_BE443312Ta14P023A08P005H091R1_006.ab1   669 
   92    MoSU018F_F02_BE443312Ta14P023A08P005H091F1_006.ab1    53 
  556  C MoSU018R_F02_BE443312Ta14P023A08P005H091R1_006.ab1   197 
  632    MoSU018F_F02_BE443312Ta14P023A08P005H091F1_006.ab1   593 
  636  C MoSU018R_F02_BE443312Ta14P023A08P005H091R1_006.ab1   117 
  652    MoSU018F_F02_BE443312Ta14P023A08P005H091F1_006.ab1   613 
  656  C MoSU018R_F02_BE443312Ta14P023A08P005H091R1_006.ab1    97 
Contig length: old 752, new 752

Contig length: old 752, new 752
New start: 0