No. words: 1410; after pruning: 1384


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:649)  645  0.00 0.00 0.00  MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1        1   650 (56)  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   (54)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   704 
   62    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1     8 
  106  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   599 
  110    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1    56 
  130  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   575 
  142    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1    88 
  258  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   447 
  282    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   228 
  402  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   303 
  414    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   360 
  430  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   275 
  450    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   396 
  474  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   231 
  570    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   516 
  578  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1   127 
  610    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   556 
  626  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1    79 
  634    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   580 
  638  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1    67 
  658    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   604 
  666  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1    39 
  670    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   616 
  686  C MoSU018R_E07_BE443312Ta15P005H03P023D091R1_055.ab1    19 
  694    MoSU018F_E07_BE443312Ta15P005H03P023D091F1_055.ab1   640 
Contig length: old 760, new 760

Contig length: old 760, new 760
New start: 0