No. words: 1492; after pruning: 1466


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 13.2 (1,1:704)  681  0.14 0.14 0.14  MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1        7   705 (39)  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   (49)   699     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   748 
   61    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1    18 
   81  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   668 
   97    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1    54 
  101  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   648 
  105    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1    62 
  149  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   600 
  153    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   110 
  157  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   592 
  161    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   118 
  185  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   564 
  189    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   146 
  301  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   448 
  309    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   266 
  504  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   245 
  508    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   465 
  528  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   221 
  532    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   489 
  556  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   193 
  572    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   529 
  600  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   149 
  604    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   561 
  624  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   125 
  628    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   585 
  640  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1   109 
  648    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   605 
  652  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1    97 
  664    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   621 
  672  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1    77 
  688    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   645 
  700  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1    49 
  720    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   677 
  739  C MoSU018R_G02_BE443312Ta15P023A08P005H091R1_004.ab1    10 
  743    MoSU018F_G02_BE443312Ta15P023A08P005H091F1_004.ab1   700 
Contig length: old 787, new 787

Contig length: old 787, new 788
New start: 0 
I Change at: 727; seg lengths: entry 1, contig 0