No. words: 1404; after pruning: 1378


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:648)  635  0.00 0.15 0.15  MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1        1   649 (56)  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   (50)   649     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   699 
   63    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1    12 
   79  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   621 
   95    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1    44 
   99  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   601 
  111    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1    60 
  131  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   569 
  135    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1    84 
  143  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   557 
  147    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1    96 
  267  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   433 
  291    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1   240 
  471  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   229 
  535    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1   484 
  551  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   149 
  567    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1   516 
  575  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1   125 
  615    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1   564 
  631  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1    69 
  647    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1   596 
  659  C MoSU018R_F07_BE443312Ta16P005H03P023D091R1_053.ab1    41 
  663    MoSU018F_F07_BE443312Ta16P005H03P023D091F1_053.ab1   612 
Contig length: old 755, new 756

Contig length: old 756, new 756
New start: 0