No. words: 1370; after pruning: 1344


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.4 (1,1:635)  630  0.00 0.00 0.00  MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1        1   634 (38)  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   (62)   636     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   698 
   66    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1     4 
  106  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   593 
  110    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1    48 
  134  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   565 
  138    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1    76 
  146  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   553 
  150    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1    88 
  214  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   485 
  222    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   160 
  434  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   265 
  446    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   384 
  474  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   225 
  486    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   424 
  518  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   181 
  546    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   484 
  562  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1   137 
  606    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   544 
  610  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1    89 
  650    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   588 
  654  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1    45 
  658    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   596 
  666  C MoSU018R_G07_BE443312Ta17P005H03P023D091R1_051.ab1    33 
  686    MoSU018F_G07_BE443312Ta17P005H03P023D091F1_051.ab1   624 
Contig length: old 734, new 734

Contig length: old 734, new 734
New start: 0