No. words: 1115; after pruning: 1089


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.0 (1,1:700)  405  0.00 0.00 0.00  MoSU018F_A03_BE443312Ta17P023A08P005H091F1_031.ab1      183   594 (2)  C MoSU018R_A03_BE443312Ta17P023A08P005H091R1_031.ab1   (0)   519   108 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1    MoSU018F_A03_BE443312Ta17P023A08P005H091F1_031.ab1     1 
  326  C MoSU018R_A03_BE443312Ta17P023A08P005H091R1_031.ab1   376 
  334    MoSU018F_A03_BE443312Ta17P023A08P005H091F1_031.ab1   334 
  374  C MoSU018R_A03_BE443312Ta17P023A08P005H091R1_031.ab1   328 
  378    MoSU018F_A03_BE443312Ta17P023A08P005H091F1_031.ab1   378 
  398  C MoSU018R_A03_BE443312Ta17P023A08P005H091R1_031.ab1   304 
  426    MoSU018F_A03_BE443312Ta17P023A08P005H091F1_031.ab1   426 
  430  C MoSU018R_A03_BE443312Ta17P023A08P005H091R1_031.ab1   272 
  434    MoSU018F_A03_BE443312Ta17P023A08P005H091F1_031.ab1   434 
  442  C MoSU018R_A03_BE443312Ta17P023A08P005H091R1_031.ab1   260 
  534    MoSU018F_A03_BE443312Ta17P023A08P005H091F1_031.ab1   534 
  538  C MoSU018R_A03_BE443312Ta17P023A08P005H091R1_031.ab1   164 
Contig length: old 701, new 701

Contig length: old 701, new 701
New start: 0