No. words: 1405; after pruning: 1379


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:651)  642  0.00 0.00 0.15  MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1        1   652 (56)  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   (46)   651     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   697 
   54    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1     8 
   58  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   640 
   62    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1    16 
   66  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   632 
   70    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1    24 
   78  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   620 
   86    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1    40 
   94  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   604 
  110    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1    64 
  126  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   572 
  134    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1    88 
  142  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   556 
  146    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1   100 
  422  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   276 
  442    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1   396 
  458  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   240 
  546    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1   500 
  558  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   140 
  566    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1   520 
  570  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1   128 
  642    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1   596 
  658  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1    40 
  666    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1   620 
  670  C MoSU018R_H07_BE443312Ta18P005H03P023D091R1_049.ab1    28 
  682    MoSU018F_H07_BE443312Ta18P005H03P023D091F1_049.ab1   636 
Contig length: old 753, new 754

Contig length: old 754, new 754
New start: 0