No. words: 1216; after pruning: 1190


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:654)  480  1.17 0.00 0.39  MoSU018F_A08_BE443312Ta19P005H03P023D091F1_064.ab1      146   657 (49)  C MoSU018R_A08_BE443312Ta19P005H03P023D091R1_064.ab1   (0)   510     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    MoSU018F_A08_BE443312Ta19P005H03P023D091F1_064.ab1     1 
  553  C MoSU018R_A08_BE443312Ta19P005H03P023D091R1_064.ab1   103 
  561    MoSU018F_A08_BE443312Ta19P005H03P023D091F1_064.ab1   561 
  586  C MoSU018R_A08_BE443312Ta19P005H03P023D091R1_064.ab1    70 
  594    MoSU018F_A08_BE443312Ta19P005H03P023D091F1_064.ab1   594 
  602  C MoSU018R_A08_BE443312Ta19P005H03P023D091R1_064.ab1    54 
  606    MoSU018F_A08_BE443312Ta19P005H03P023D091F1_064.ab1   606 
  630  C MoSU018R_A08_BE443312Ta19P005H03P023D091R1_064.ab1    26 
  634    MoSU018F_A08_BE443312Ta19P005H03P023D091F1_064.ab1   634 
Contig length: old 706, new 706

Contig length: old 706, new 706
New start: 0