No. words: 1359; after pruning: 1333


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.7 (1,1:703)  613  0.16 0.00 0.00  MoSU018F_C03_BE443312Ta19P023A08P005H091F1_027.ab1        4   625 (0)  C MoSU018R_C03_BE443312Ta19P023A08P005H091R1_027.ab1   (33)   701    80 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU018R_C03_BE443312Ta19P023A08P005H091R1_027.ab1   734 
   37    MoSU018F_C03_BE443312Ta19P023A08P005H091F1_027.ab1     7 
   73  C MoSU018R_C03_BE443312Ta19P023A08P005H091R1_027.ab1   662 
   77    MoSU018F_C03_BE443312Ta19P023A08P005H091F1_027.ab1    47 
  489  C MoSU018R_C03_BE443312Ta19P023A08P005H091R1_027.ab1   246 
  493    MoSU018F_C03_BE443312Ta19P023A08P005H091F1_027.ab1   463 
  545  C MoSU018R_C03_BE443312Ta19P023A08P005H091R1_027.ab1   190 
  569    MoSU018F_C03_BE443312Ta19P023A08P005H091F1_027.ab1   539 
  573  C MoSU018R_C03_BE443312Ta19P023A08P005H091R1_027.ab1   162 
Contig length: old 734, new 734

Contig length: old 734, new 734
New start: 0