No. words: 1442; after pruning: 1416


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:698)  672  0.43 0.14 0.14  MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1        1   697 (0)  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   (46)   699     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  338 nodes

 171 str. conn. components

Path
    1  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   745 
   60    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1    13 
   76  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   670 
   88    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1    41 
  152  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   594 
  156    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   109 
  296  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   450 
  304    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   257 
  472  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   274 
  492    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   445 
  496  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   250 
  508    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   461 
  524  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   222 
  528    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   481 
  536  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   210 
  540    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   493 
  544  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   202 
  548    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   501 
  556  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   190 
  568    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   521 
  596  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   150 
  608    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   561 
  616  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   130 
  624    MoSU018F_F03_BE443312Ta22P023A08P005H091F1_021.ab1   577 
  632  C MoSU018R_F03_BE443312Ta22P023A08P005H091R1_021.ab1   114 
Contig length: old 745, new 745

Contig length: old 745, new 746
New start: 0 
I Change at: 732; seg lengths: entry 1, contig 0