No. words: 1385; after pruning: 1359


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:592)  562  0.84 0.17 0.00  MoSU018F_B01_BE443312Td02P023A08P005H091F1_013.ab1        1   592 (74)  C MoSU018R_B01_BE443312Td02P023A08P005H091R1_013.ab1   (126)   593     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C MoSU018R_B01_BE443312Td02P023A08P005H091R1_013.ab1   719 
  138    MoSU018F_B01_BE443312Td02P023A08P005H091F1_013.ab1    12 
  158  C MoSU018R_B01_BE443312Td02P023A08P005H091R1_013.ab1   562 
  162    MoSU018F_B01_BE443312Td02P023A08P005H091F1_013.ab1    36 
  642  C MoSU018R_B01_BE443312Td02P023A08P005H091R1_013.ab1    78 
  646    MoSU018F_B01_BE443312Td02P023A08P005H091F1_013.ab1   520 
Contig length: old 792, new 792

Contig length: old 792, new 792
New start: 0