No. words: 1466; after pruning: 1440


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:696)  681  0.00 0.14 0.14  MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1        1   697 (26)  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   (46)   697     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   743 
   94    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1    47 
  154  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   590 
  162    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   115 
  302  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   442 
  306    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   259 
  454  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   290 
  462    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   415 
  502  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   242 
  506    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   459 
  526  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   218 
  530    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   483 
  562  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   182 
  574    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   527 
  594  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   150 
  622    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   575 
  630  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1   114 
  662    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   615 
  666  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1    78 
  726    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   679 
  736  C MoSU018R_C01_BE443312Td03P023A08P005H091R1_011.ab1     9 
  740    MoSU018F_C01_BE443312Td03P023A08P005H091F1_011.ab1   693 
Contig length: old 769, new 770

Contig length: old 770, new 770
New start: 0