No. words: 1461; after pruning: 1435


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:675)  664  0.00 0.15 0.00  MoSU018F_E01_BE443312Td05P023A08P005H091F1_007.ab1        1   676 (62)  C MoSU018R_E01_BE443312Td05P023A08P005H091R1_007.ab1   (46)   677     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  336 nodes

 170 str. conn. components

Path
    1  C MoSU018R_E01_BE443312Td05P023A08P005H091R1_007.ab1   723 
   97    MoSU018F_E01_BE443312Td05P023A08P005H091F1_007.ab1    50 
  141  C MoSU018R_E01_BE443312Td05P023A08P005H091R1_007.ab1   583 
  157    MoSU018F_E01_BE443312Td05P023A08P005H091F1_007.ab1   110 
  181  C MoSU018R_E01_BE443312Td05P023A08P005H091R1_007.ab1   543 
  185    MoSU018F_E01_BE443312Td05P023A08P005H091F1_007.ab1   138 
  197  C MoSU018R_E01_BE443312Td05P023A08P005H091R1_007.ab1   527 
  201    MoSU018F_E01_BE443312Td05P023A08P005H091F1_007.ab1   154 
Contig length: old 785, new 785

Contig length: old 785, new 785
New start: 0