No. words: 1494; after pruning: 1468


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.7 (1,1:708)  688  0.00 0.14 0.14  MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1        5   707 (40)  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1   (42)   705     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1   747 
   60    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1    21 
   88  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1   660 
   92    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1    53 
  144  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1   604 
  148    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1   109 
  152  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1   596 
  164    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1   125 
  632  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1   116 
  636    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1   597 
  644  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1   104 
  652    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1   613 
  684  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1    64 
  692    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1   653 
  704  C MoSU018R_F01_BE443312Td06P023A08P005H091R1_005.ab1    44 
  716    MoSU018F_F01_BE443312Td06P023A08P005H091F1_005.ab1   677 
Contig length: old 785, new 786

Contig length: old 786, new 786
New start: 0