No. words: 1488; after pruning: 1462


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.5 (1,1:701)  692  0.14 0.00 0.00  MoSU018F_G01_BE443312Td07P023A08P005H091F1_003.ab1        1   702 (42)  C MoSU018R_G01_BE443312Td07P023A08P005H091R1_003.ab1   (42)   702     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C MoSU018R_G01_BE443312Td07P023A08P005H091R1_003.ab1   744 
   66    MoSU018F_G01_BE443312Td07P023A08P005H091F1_003.ab1    24 
   74  C MoSU018R_G01_BE443312Td07P023A08P005H091R1_003.ab1   671 
   94    MoSU018F_G01_BE443312Td07P023A08P005H091F1_003.ab1    52 
   98  C MoSU018R_G01_BE443312Td07P023A08P005H091R1_003.ab1   647 
  102    MoSU018F_G01_BE443312Td07P023A08P005H091F1_003.ab1    60 
  154  C MoSU018R_G01_BE443312Td07P023A08P005H091R1_003.ab1   591 
  162    MoSU018F_G01_BE443312Td07P023A08P005H091F1_003.ab1   120 
  705  C MoSU018R_G01_BE443312Td07P023A08P005H091R1_003.ab1    40 
  717    MoSU018F_G01_BE443312Td07P023A08P005H091F1_003.ab1   675 
Contig length: old 786, new 786

Contig length: old 786, new 786
New start: 0