No. words: 1509; after pruning: 1483


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:843)  651  0.30 0.00 0.00  MoSU003F_B07_BE443312Tu02P005H03H091F1_057.ab1       51   715 (0)  C MoSU003R_B07_BE443312Tu02P005H03H091R1_057.ab1   (0)   794   130 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1    MoSU003F_B07_BE443312Tu02P005H03H091F1_057.ab1     1 
  410  C MoSU003R_B07_BE443312Tu02P005H03H091R1_057.ab1   435 
  414    MoSU003F_B07_BE443312Tu02P005H03H091F1_057.ab1   414 
  513  C MoSU003R_B07_BE443312Tu02P005H03H091R1_057.ab1   332 
  517    MoSU003F_B07_BE443312Tu02P005H03H091F1_057.ab1   517 
  525  C MoSU003R_B07_BE443312Tu02P005H03H091R1_057.ab1   320 
  529    MoSU003F_B07_BE443312Tu02P005H03H091F1_057.ab1   529 
  533  C MoSU003R_B07_BE443312Tu02P005H03H091R1_057.ab1   312 
  545    MoSU003F_B07_BE443312Tu02P005H03H091F1_057.ab1   545 
  549  C MoSU003R_B07_BE443312Tu02P005H03H091R1_057.ab1   296 
  605    MoSU003F_B07_BE443312Tu02P005H03H091F1_057.ab1   605 
  609  C MoSU003R_B07_BE443312Tu02P005H03H091R1_057.ab1   236 
Contig length: old 844, new 844

Contig length: old 844, new 844
New start: 0