No. words: 1009; after pruning: 983


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 6.4 (1,1:548)  396  0.73 0.24 0.00  MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1        4   414 (3)  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   (45)   547   136 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  192 nodes

 98 str. conn. components

Path
    1  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   592 
  141    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1    98 
  193  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   400 
  201    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   158 
  205  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   388 
  217    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   174 
  221  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   372 
  233    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   190 
  241  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   352 
  249    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   206 
  253  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   340 
  261    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   218 
  269  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   324 
  273    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   230 
  281  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   312 
  285    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   242 
  305  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   288 
  341    MoSU007F_A11_BE443312Tu02P015H05H111F1_095.ab1   298 
  345  C MoSU007R_A11_BE443312Tu02P015H05H111R1_095.ab1   248 
Contig length: old 592, new 592

Contig length: old 592, new 592
New start: 0