No. words: 1204; after pruning: 1178


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:479)  458  0.00 0.21 0.42  MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1        1   481 (123)  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   (120)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   600 
  161    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1    40 
  169  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   432 
  173    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1    52 
  197  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   404 
  225    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   104 
  233  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   368 
  237    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   116 
  253  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   348 
  269    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   148 
  285  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   316 
  293    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   172 
  337  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   264 
  357    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   236 
  377  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   224 
  421    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   300 
  437  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   164 
  441    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   320 
  501  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1   100 
  505    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   384 
  509  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1    92 
  513    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   392 
  521  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1    80 
  525    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   404 
  545  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1    56 
  549    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   428 
  557  C MoSU002R_B11_BE443554Ld02P005B05B111R2_089.ab1    44 
  561    MoSU002F_B11_BE443554Ld02P005B05B111F2_089.ab1   440 
Contig length: old 724, new 725

Contig length: old 725, new 725
New start: 0