No. words: 1187; after pruning: 1161


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:448)  439  0.00 0.00 0.00  MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1        1   449 (147)  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   (142)   449     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   591 
  194    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1    52 
  210  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   382 
  226    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1    84 
  230  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   362 
  234    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1    92 
  238  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   354 
  246    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1   104 
  258  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   334 
  278    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1   136 
  290  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   302 
  334    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1   192 
  342  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   250 
  350    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1   208 
  458  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   134 
  466    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1   324 
  474  C MoSU006R_B02_BE443554Ld04P015A04A101R1_013.ab1   118 
  478    MoSU006F_B02_BE443554Ld04P015A04A101F1_013.ab1   336 
Contig length: old 738, new 738

Contig length: old 738, new 738
New start: 0