No. words: 1205; after pruning: 1179


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:479)  459  0.00 0.21 0.42  MoSU002F_E11_BE443554Ld05P005B05B111F2_083.ab1        1   481 (116)  C MoSU002R_E11_BE443554Ld05P005B05B111R2_083.ab1   (128)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C MoSU002R_E11_BE443554Ld05P005B05B111R2_083.ab1   608 
  189    MoSU002F_E11_BE443554Ld05P005B05B111F2_083.ab1    60 
  193  C MoSU002R_E11_BE443554Ld05P005B05B111R2_083.ab1   416 
  233    MoSU002F_E11_BE443554Ld05P005B05B111F2_083.ab1   104 
  241  C MoSU002R_E11_BE443554Ld05P005B05B111R2_083.ab1   368 
  245    MoSU002F_E11_BE443554Ld05P005B05B111F2_083.ab1   116 
  261  C MoSU002R_E11_BE443554Ld05P005B05B111R2_083.ab1   348 
  317    MoSU002F_E11_BE443554Ld05P005B05B111F2_083.ab1   188 
  341  C MoSU002R_E11_BE443554Ld05P005B05B111R2_083.ab1   268 
  365    MoSU002F_E11_BE443554Ld05P005B05B111F2_083.ab1   236 
  385  C MoSU002R_E11_BE443554Ld05P005B05B111R2_083.ab1   224 
  421    MoSU002F_E11_BE443554Ld05P005B05B111F2_083.ab1   292 
Contig length: old 725, new 726

Contig length: old 726, new 726
New start: 0