No. words: 1193; after pruning: 1167


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:460)  439  0.00 0.00 0.65  MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1        1   463 (118)  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   (152)   460     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   612 
  177    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1    25 
  181  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   432 
  201    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1    49 
  213  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   400 
  245    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1    93 
  253  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   360 
  257    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1   105 
  269  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   344 
  305    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1   153 
  325  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   288 
  337    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1   185 
  389  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   224 
  397    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1   245 
  441  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   172 
  489    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1   337 
  497  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1   116 
  505    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1   353 
  521  C MoSU006R_D02_BE443554Ld06P015A04A101R1_014.ab1    92 
  537    MoSU006F_D02_BE443554Ld06P015A04A101F1_014.ab1   385 
Contig length: old 732, new 733

Contig length: old 733, new 733
New start: 0