No. words: 1374; after pruning: 1348


Histogram of relative pair offsets, for read pairs with multiple alignments:
40     2
42     2
82     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.3 (1,1:556)  531  0.18 0.00 0.18  MoSU006F_F02_BE443554Ld08P015A04A101F1_015.ab1        1   553 (130)  C MoSU006R_F02_BE443554Ld08P015A04A101R1_015.ab1   (135)   556     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C MoSU006R_F02_BE443554Ld08P015A04A101R1_015.ab1   691 
  161    MoSU006F_F02_BE443554Ld08P015A04A101F1_015.ab1    26 
  197  C MoSU006R_F02_BE443554Ld08P015A04A101R1_015.ab1   495 
  217    MoSU006F_F02_BE443554Ld08P015A04A101F1_015.ab1    82 
  221  C MoSU006R_F02_BE443554Ld08P015A04A101R1_015.ab1   471 
  261    MoSU006F_F02_BE443554Ld08P015A04A101F1_015.ab1   126 
  265  C MoSU006R_F02_BE443554Ld08P015A04A101R1_015.ab1   427 
  589    MoSU006F_F02_BE443554Ld08P015A04A101F1_015.ab1   454 
  593  C MoSU006R_F02_BE443554Ld08P015A04A101R1_015.ab1    99 
  657    MoSU006F_F02_BE443554Ld08P015A04A101F1_015.ab1   522 
Contig length: old 817, new 818

Contig length: old 818, new 818
New start: 0