No. words: 1371; after pruning: 1345


Histogram of relative pair offsets, for read pairs with multiple alignments:
41     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:546)  531  0.18 0.00 0.00  MoSU006F_G02_BE443554Ld09P015A04A101F1_008.ab1        1   547 (142)  C MoSU006R_G02_BE443554Ld09P015A04A101R1_008.ab1   (135)   547     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C MoSU006R_G02_BE443554Ld09P015A04A101R1_008.ab1   682 
  139    MoSU006F_G02_BE443554Ld09P015A04A101F1_008.ab1     4 
  143  C MoSU006R_G02_BE443554Ld09P015A04A101R1_008.ab1   540 
  159    MoSU006F_G02_BE443554Ld09P015A04A101F1_008.ab1    24 
  163  C MoSU006R_G02_BE443554Ld09P015A04A101R1_008.ab1   520 
  171    MoSU006F_G02_BE443554Ld09P015A04A101F1_008.ab1    36 
  207  C MoSU006R_G02_BE443554Ld09P015A04A101R1_008.ab1   476 
  668    MoSU006F_G02_BE443554Ld09P015A04A101F1_008.ab1   533 
Contig length: old 824, new 824

Contig length: old 824, new 824
New start: 0