No. words: 1383; after pruning: 1357


Histogram of relative pair offsets, for read pairs with multiple alignments:
40     2
42     2
82     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:563)  546  0.00 0.00 0.18  MoSU006F_H02_BE443554Ld10P015A04A101F1_016.ab1        1   564 (131)  C MoSU006R_H02_BE443554Ld10P015A04A101R1_016.ab1   (125)   563     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C MoSU006R_H02_BE443554Ld10P015A04A101R1_016.ab1   688 
  161    MoSU006F_H02_BE443554Ld10P015A04A101F1_016.ab1    36 
  205  C MoSU006R_H02_BE443554Ld10P015A04A101R1_016.ab1   484 
  217    MoSU006F_H02_BE443554Ld10P015A04A101F1_016.ab1    92 
  229  C MoSU006R_H02_BE443554Ld10P015A04A101R1_016.ab1   460 
  657    MoSU006F_H02_BE443554Ld10P015A04A101F1_016.ab1   532 
Contig length: old 819, new 820

Contig length: old 820, new 820
New start: 0