No. words: 771; after pruning: 745


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:384)  350  0.00 0.27 0.27  MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1        1   369 (0)  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   (17)   385    17 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   402 
   54    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1    36 
   70  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   333 
   82    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1    64 
   86  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   317 
   90    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1    72 
   98  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   305 
  118    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   100 
  126  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   277 
  134    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   116 
  146  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   257 
  166    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   148 
  178  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   225 
  190    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   172 
  198  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   205 
  214    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   196 
  218  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   185 
  226    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   208 
  234  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   169 
  242    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   224 
  246  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   157 
  254    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   236 
  258  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   145 
  262    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   244 
  274  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   129 
  278    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   260 
  286  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   117 
  294    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   276 
  302  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1   101 
  314    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   296 
  322  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1    81 
  326    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   308 
  334  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1    69 
  346    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   328 
  350  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1    53 
  366    MoSU006F_D03_BE443572As02P015B04B101F1_026.ab1   348 
  381  C MoSU006R_D03_BE443572As02P015B04B101R1_026.ab1    23 
Contig length: old 402, new 403

Contig length: old 403, new 402
New start: 0 
D Change at: 32; seg lengths: entry 0, contig 1