No. words: 1015; after pruning: 989


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:374)  359  0.00 0.53 0.00  MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1        1   374 (135)  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   (130)   376     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   506 
  193    MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1    61 
  205  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   302 
  237    MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1   105 
  241  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   266 
  261    MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1   129 
  265  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   242 
  281    MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1   149 
  289  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   218 
  321    MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1   189 
  341  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   166 
  349    MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1   217 
  357  C MoSU003R_H01_BE443572Ld02P005D01D071R1_012.ab1   150 
  361    MoSU003F_H01_BE443572Ld02P005D01D071F1_012.ab1   229 
Contig length: old 640, new 641

Contig length: old 641, new 641
New start: 0