No. words: 1031; after pruning: 1005


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.6 (1,1:381)  367  0.00 0.00 0.52  MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1        1   383 (139)  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1   (128)   381     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1   509 
  328    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   200 
  340  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1   170 
  344    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   216 
  352  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1   158 
  360    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   232 
  376  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1   134 
  388    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   260 
  392  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1   118 
  396    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   268 
  416  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1    94 
  428    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   300 
  440  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1    70 
  452    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   324 
  460  C MoSU006R_H03_BE443572Ld02P015B04B101R1_028.ab1    50 
  472    MoSU006F_H03_BE443572Ld02P015B04B101F1_028.ab1   344 
Contig length: old 649, new 650

Contig length: old 650, new 650
New start: 0