No. words: 1022; after pruning: 996


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:380)  360  0.53 0.53 0.00  MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1        1   380 (129)  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1   (131)   382     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1   513 
  197    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1    64 
  217  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1   297 
  277    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1   144 
  301  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1   213 
  329    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1   196 
  341  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1   173 
  349    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1   216 
  369  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1   145 
  373    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1   240 
  389  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1   125 
  397    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1   264 
  417  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1    97 
  421    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1   288 
  441  C MoSU003R_A02_BE443572Ld03P005D01D071R1_005.ab1    73 
  453    MoSU003F_A02_BE443572Ld03P005D01D071F1_005.ab1   320 
Contig length: old 641, new 642

Contig length: old 642, new 642
New start: 0