No. words: 1021; after pruning: 995


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:375)  362  0.27 0.00 0.27  MoSU006F_A04_BE443572Ld03P015B04B101F1_021.ab1        1   376 (134)  C MoSU006R_A04_BE443572Ld03P015B04B101R1_021.ab1   (136)   375     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU006R_A04_BE443572Ld03P015B04B101R1_021.ab1   511 
  372    MoSU006F_A04_BE443572Ld03P015B04B101F1_021.ab1   236 
  376  C MoSU006R_A04_BE443572Ld03P015B04B101R1_021.ab1   136 
  400    MoSU006F_A04_BE443572Ld03P015B04B101F1_021.ab1   264 
  416  C MoSU006R_A04_BE443572Ld03P015B04B101R1_021.ab1    96 
  456    MoSU006F_A04_BE443572Ld03P015B04B101F1_021.ab1   320 
Contig length: old 645, new 646

Contig length: old 646, new 646
New start: 0