No. words: 1028; after pruning: 1002


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (1,1:382)  367  0.00 0.52 0.00  MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1        1   382 (127)  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   (135)   384     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   519 
  202    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1    65 
  230  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   290 
  242    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   105 
  246  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   274 
  254    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   117 
  258  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   262 
  322    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   185 
  346  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   174 
  354    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   217 
  378  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   142 
  386    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   249 
  398  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   122 
  402    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   265 
  414  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1   106 
  426    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   289 
  438  C MoSU003R_B02_BE443572Ld04P005D01D071R1_013.ab1    82 
  446    MoSU003F_B02_BE443572Ld04P005D01D071F1_013.ab1   309 
Contig length: old 645, new 646

Contig length: old 646, new 646
New start: 0